request

package
v0.0.0-...-27e8010 Latest Latest
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Published: Jul 10, 2013 License: BSD-2-Clause Imports: 21 Imported by: 0

Documentation

Index

Constants

This section is empty.

Variables

This section is empty.

Functions

func AuthError

func AuthError(err error, cx *goweb.Context)

func Authenticate

func Authenticate(req *http.Request) (u *user.User, err error)

func CreateBamIndex

func CreateBamIndex(bamFile string) (err error)

func LoadBamIndex

func LoadBamIndex(bamFile string) (err error)

func Log

func Log(req *http.Request)

func ParseMultipartForm

func ParseMultipartForm(r *http.Request) (params map[string]string, files node.FormFiles, err error)

helper function for create & update

func ParseSamtoolsArgs

func ParseSamtoolsArgs(query *Query) (argv []string, err error)

helper function to translate args in URL query to samtools args manual: http://samtools.sourceforge.net/samtools.shtml

func UnLoadBamIndex

func UnLoadBamIndex(bamFile string) (err error)

Types

type Query

type Query struct {
	// contains filtered or unexported fields
}

func Q

func Q(l map[string][]string) *Query

func (*Query) All

func (q *Query) All() map[string][]string

func (*Query) Has

func (q *Query) Has(key string) bool

func (*Query) List

func (q *Query) List(key string) []string

func (*Query) Value

func (q *Query) Value(key string) string

type Streamer

type Streamer struct {
	R           []file.SectionReader
	W           http.ResponseWriter
	ContentType string
	Filename    string
	Size        int64
	Filter      filter.FilterFunc
}

func (*Streamer) Stream

func (s *Streamer) Stream() (err error)

func (*Streamer) StreamSamtools

func (s *Streamer) StreamSamtools(filePath string, region string, args ...string) (err error)

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